Nice, to meet you!
Hi, I'm Juan Felipe, a bioinformatician who loves digging into the code of life.
Whether it's unraveling the mysteries of evolution, harnessing the power of cloud computing for genomic
analysis, or experimenting with the latest data visualization techniques, I'm passionate about pushing
boundaries and finding creative solutions to questions, problems, and puzzles.
Background

As part of my thesis for Biology at the National University of Colombia, I started my career working on drift algae and their taxonomy. Then I joined Manihot Biotec, lab specialized in plant immunity. There, I learned about bioinformatics, genome annotation, molecular modelling, and phylogenetics.

For my Masters degree in Molecular Biology at the University of Wyoming, I wrote my first program, which was used to analyze how the intrinsic protein disorder in flavivirus proteins has a clear phylogenetic signal.

In my PhD for Biological Sciences at the Rokas Lab at Vanderbilt University, I studied how clusters of gene duplicates evolved in the mammalian phylogeny, and the different ways in which gene clusters improve molecular diversity, with a specific interest in the evolution of pregnancy and its implications in studying preterm birth in humans. (and taught taught classes on Latin American food at the University)

In my postdoc I moved to the RIKEN institute in Japan. At the Laboratory for Phyloinformatics at the RIKEN Center for Biosystems Dynamics Research I developed computational tools to study the evolution of gene families in sharks, a basal. Then, as an SPDR recipient, I worked in the Laboratory for Advanced genomics Circuit at the Center for Integrative Medical Sciences at RIKEN, I developed data analysis and visualization applications to study chromatin dynamics in an evolutionary context.
My Skills
During this journey, I have collected some cool tools. Check them out!
Back to the real world
After my post-doctoral fellowship at RIKEN in Japan, I started my professional career as a bioinformatician and computational biologist. At the Genomic and Data Analytics Core from the Cancer Sciences Institute in the National University of Singapore, I led a great team of scientists and software developers to build the cloud infrastructure the institute needed to run genomic analytical pipelines at scale. This work has made a positive impact in the scientific community, as it allows researchers to easily run genomic workflows in a cost-effective way from an intuitive interface.
In my current role as a Senior Bioinformatics Engineer at Lifebit, my mission is to be the touch point with our clients in Singapore, to communicate and develop technical insights to deploy and maintain the bioinformatics tools made by the company. This involves a high degree of communication with stakeholders at the client's organization and developers of Lifebit, to translate the needs of the clients into technical and scientific products.