Publications

Articles

Ortiz, J. F., Rokas, A. (2016). CTDGFinder: A Novel Homology-Based Algorithm for Identifying Closely Spaced Clusters of Tandemly Duplicated Genes. Molecular Biology and Evolution 34 (1): 215-229

Soto, J. C., Ortiz, J. F., Perlaza-Jimenez, L., Vásquez, A. X., Becerram L. A., Mathew, B., Leon, J., Bernal, A, J., Ballvora, A. J., Lopez, C, E. (2015). A genetic map of cassava (Manihot esculenta Crantz) with integrated physical mapping of immunity-related genes. BMC Genomics 16 (190):

Leal, L. G., Perez, A., Quintero, A., Bayona, A., Ortiz, J. F., Gangadharan, A., MacKey, D., Lopez, C. E., Lopez-Kleine, L. (2013). Identification of Immunity-related Genes in Arabidopsis and Cassava Using Genomic Data. Genomics, Proteomics and Bioinformatics 11 (6): 345-353

Arrieta-Ortiz, M., [other 42 more authors including Ortiz, J., F.], Bernal, A. (2013). Genomic Survey of Pathogenicity Determinants and VNTR Markers in the Cassava Bacterial Pathogen Xanthomonas axonopodis pv. Manihotis Strain CIO151. PlOS One 8 (11): e79704

Richmond, K., Masterton, P., Ortiz, J. F., Siltberg-Liberles, J. (2013). Did the prion protein become vulnerable to misfolding after an evolutionary divide and conquer event?. Journal of Biomolecular Structure and Dynamics 32 (7): 1074-1084

Ortiz, J. F., MacDonald, M. L., Masterson, P., Uversky, V. N., Siltberg-Liberles, J. (2013). Rapid Evolutionary Dynamics of Structural Disorder as a Potential Driving Force for Biological Divergence in Flaviviruses. Genome Biology and Evolution 5 (3): 504-513

Ortiz, J. F., Gavio, B. (2010). Notes on the marine algae of the International Biosphere Reserve Seaflower, Caribbean Colombia II: diversity of drift algae in San Andres island, Caribbean Colombia. Caribbean Journal of Science 46 (2-3): 313-321

Oral and poster presentations

A Novel Homology-based Algorithm for Identifying Closely Spaced Clusters of Tandemly Duplicated Genes: Quest for Orthologs 5. United States, Los Angeles. July, 2018

Where did chromosome 19 got its gene clusters?: SMBE Conference. Japan, Yokohama. July, 2018

Quests and Adventures in Genomic Geography: Three minutes thesis competition. Vanderbilt University, department of Biological Sciences. United States, Nashville. May, 2017